Sep 18, 2022The K-mer File Format: a standardized and compact disk representation of sets of k-mers. Bioinformatics Dufresne Y, Lemane T, Marijon P, Peterlongo P, Rahman A, Kokot M, Medvedev P, Deorowicz S, Chikhi R. Sets of k-mers are...
Apr 29, 2022kmtricks: efficient and flexible construction of Bloom filters for large sequencing data collectionsBioinformatics Advances Téo Lemane, Paul Medvedev, Rayan Chikhi, Pierre Peterlongo When indexing large collections of short-read...