Bioinformatics Advances Téo Lemane, Paul Medvedev, Rayan Chikhi, Pierre Peterlongo When indexing large collections of short-read...

Published in Bioinformatics Mallet V, Nilges M, Bouvier G Summary: We implemented the Self-Organizing Maps algorithm running efficiently...

NAR Genomics and Bioinformatics Perrin A, Rocha EPC The study of the gene repertoires of microbial species, their pangenomes, has become...

J Cell Sci Mitchell C, Caroff L, Solis-Lemus JA, Reyes-Aldasoro CC, Warburton F, de Chaumont F, Dufour A, Dallongeville S, Olivo-Marin...

Nature Methods Thomas Blanc, Mohamed El Beheiry, Clément Caporal, Jean-Baptiste Masson, Bassam Hajj. The quantity of experimentally...

Nucleic Acids Res Fabrice Allain, Fabien Mareuil, Hervé Ménager, Michael Nilges, Benjamin Bardiaux. Nuclear magnetic resonance (NMR)...

Bioinformatics Marchet C, Iqbal Z, Gautheret D, Salson M, Chikhi R. Motivation: In this work we present REINDEER, a novel computational...

Brief Bioinform Lima L, Marchet C, Caboche S, da Silva C, Istace B, Aury JM, Touzet H, Chikhi R Motivation Nanopore long-read sequencing...

Bioinformatics Pierre Marijon, Rayan Chikhi, Jean-Stéphane Varré Motivation: Genome assembly is increasingly performed on long,...