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Coordinators And Leaders (Steering Committee)
COORDINATORS
THOMAS BOURGERON
Génétique humaine et fonctions cognitives
Institut Pasteur, 25 rue du Docteur Roux, 75015 Paris
Tel +331 4061 3216
thomas.bourgeron@pasteur.fr
Main research interests: understand the causes of autism spectrum disorders (ASD) performing a thorough genomic and clinical profiling of a large number of individuals using high-throughput genotyping/sequencing, biochemistry and brain imaging.
LEADERS
CHRISTOPHE ZIMMER
Imaging and Modeling
Main research interests: algorithms for microscopy image analysis, high-resolution and high throughput imaging approaches, computational imaging methods, single molecule super-resolution imaging methods.
EDUARDO ROCHA
Microbial Evolutionary Genomics
Main research interests: evolution of bacterial genomes, and especially the interplay between the organization and dynamics of the genomes of pathogenic bacteria.
TAMARA GILES-VERNICK
Anthropology and Ecology of Disease Emergence
Main research interests: research at the interstices of medical anthropology and ethnohistory (historical research using anthropological tools), investigating infectious disease transmission and global health interventions in Africa.
ARNAUD FONTANET
Epidemiology of Emerging Diseases
Main research interests: Public health, emerging diseases epidemiology.
MARIE-LISE GOUGEON
Virus and Innate Immunity
Main research interests: immunity to viruses, vaccines and autoimmunity.
MICHAEL NILGES
Structural Bioinformatics
Institut Pasteur, 25 rue du Docteur Roux, 75015 Paris
michael.nilges@pasteur.fr
Main research interests: computational structural biology and computational biophysics.
michael.nilges@pasteur.fr
Main research interests: computational structural biology and computational biophysics.
JEAN-CHRISTOPHE OLIVO-MARIN
Biological Image Analysis
Main research interests: image analysis of multidimensional microscopy images, computer vision and motion analysis for cellular dynamics, and in mathematical approaches for biological imaging.
PABLO NARRO GIL
Epigenomics, Proliferation and the Identity of Cells – EPIC
Main research interests: gene regulatory processes governing the biology of mouse Embryonic Stem (ES) cells
JEAN-FRANCOIS DELEUZE
National Center for Genotyping CNRGH - CEA
The CNRGH is the French national research center which enables a response to scientific questions necessitating high throughput sequencing and genotyping thanks to the development and deployment of innovative integrated technologies.
SOPHIE SCHBATH
Applied Mathematics and Informatics from Genome to the Environment (MaIAGE)
Head of the MaIAGE lab.
The MaIAGE research laboratory gathers mathematicians, computer scientists, bioinformaticians and biologists to tackle problems coming from biology, agronomy and ecology; The addressed questions may concern processes at very different levels: molecular, cellular or multicellular, individual, populations, ecosystems or landscapes.
The MaIAGE research laboratory gathers mathematicians, computer scientists, bioinformaticians and biologists to tackle problems coming from biology, agronomy and ecology; The addressed questions may concern processes at very different levels: molecular, cellular or multicellular, individual, populations, ecosystems or landscapes.
GUILLAUME LACHENAL
Associate Professor in History of Science at the Université Paris Diderot – Science Po Medialab
Guillaume Lachenal is Associate Professor in History of Science at the Université Paris Diderot. He studies the history and anthropology of biomedicine in Africa. He is currently coordinating the ANR project "Memorials and remains of medical research in Africa" (MEREAF), an anthropological and archeological exploration of the ruins and memories associated with the past in African medical institutions. He is the president of the Social Sciences and Public Health scientific committee at the National Agency for AIDS Research (ANRS).
ERIK DENAMUR
Professor of Biochemistry and Molecular Biology
Infection, Antimicrobiens, Modélisation, Evolution (IAME)
UMR 1137 INSERM, Universités Paris Diderot et Paris Nord
Sorbonne Paris Cité
Faculté de Médecine Site Xavier Bichat
16 rue Henri Huchard 75018 Paris France
erick.denamur@inserm.fr
UMR 1137 INSERM, Universités Paris Diderot et Paris Nord
Sorbonne Paris Cité
Faculté de Médecine Site Xavier Bichat
16 rue Henri Huchard 75018 Paris France
erick.denamur@inserm.fr
MONICA SALA
Executive Director for Education of the Institut Pasteur in Paris
Executive Director for Education of the Institut Pasteur in Paris.
CAMILLE GAULON
Scientific Coordinator of the FIRE PhD program
The FIRE Doctoral School is an interdisciplinary program that promotes ambitious research projects involving interactions between a wide range of academic disciplines in the pursuit of understanding living systems, education, and discovery.
HUGUES ASCHARD
Biocomputational biology
The enormous amount of genetic and genomic data generated in the last decade shows great promise in our ability to understand better human diseases and improving public health. Yet, the genetic architecture of complex human phenotypes remains elusive, and important questions are still unanswered. Our research addresses methodological issues related to the analysis of large multidimensional data in genetics and genomics. It focuses on particular on the development and application of innovative methods that aim at i) improving association mapping in large genomics datasets where multiple correlated variables are measured across multiple biological levels; ii) allowing for the robust evaluation of causal models that include both genetic, genomic, clinical and environmental data; and iii) identifying and targeting discoveries that have the highest potential clinical utility. We have developed several packages for the analysis of genetic data in human. Most of them are available here: https://gitlab.pasteur.fr/statistical-genetics
RAYAN CHIKHI
Sequence Bioinformatics
We are a computational team that researches algorithms for big biological data, such as next-generation sequencing data. Our research roots are close to Computer Science, but the primary goal of the group is to apply research products to bioinformatics and biology.
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