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An ensemble model based on early predictors to forecast COVID-19 healthcare demand in France
PNAS Paireau J, Andronico A, Hoze N, Layan M, Crépey P, Roumagnac A, Lavielle M, Boelle PY, Cauchemez S Short-term forecasting of the...
May 2, 2022
kmtricks: efficient and flexible construction of Bloom filters for large sequencing data collections
Bioinformatics Advances Téo Lemane, Paul Medvedev, Rayan Chikhi, Pierre Peterlongo When indexing large collections of short-read...
Apr 28, 2022
Global spatial dynamics and vaccine-induced fitness changes of Bordetella pertussis
Sci Transl Med Lefrancq N, Bouchez V, Fernandes N, Barkoff AM, Bosch T, Dalby T, Åkerlund T, Darenberg J, Fabianova K, Vestrheim DF, Fry...
Apr 26, 2022
Spatial Analysis For Histopathology: A Statistical Approach
2022 IEEE 19th International Symposium on Biomedical Imaging Mukherjee S, V. Meas-Yedid, M. Bokobza, T. Lagache, A. Corthay and J. -C....
Apr 25, 2022
3D cell morphology detection by association for embryo heart morphogenesis
Biological Imaging Sarkar, R., Darby, D., Meilhac, S., & Olivo-Marin, J Advances in tissue engineering for cardiac regenerative medicine...
Apr 21, 2022
The genomic signatures of natural selection in admixed human populations
Am J Hum Genet Cuadros-Espinoza S, Laval G, Quintana-Murci L, Patin E Admixture has been a pervasive phenomenon in human history,...
Apr 6, 2022
Listeriosis, a model infection to study host-pathogen interactions in vivo
Curr Opin Microbiol Kammoun H, Kim M, Hafner L, Gaillard J, Disson O, Lecuit M Listeria monocytogenes (Lm) is a foodborne pathogen and...
Mar 31, 2022
Cell Instance Segmentation Using Z-Stacks in Digital Cytology
2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI), Kolkata, India, 2022 Bouyssoux, R. Fezzani and J. -C. Olivo-Marin...
Mar 27, 2022
IntegronFinder 2.0: Identification and Analysis of Integrons across Bacteria
Full title: IntegronFinder 2.0: Identification and Analysis of Integrons across Bacteria, with a Focus on Antibiotic Resistance in...
Mar 24, 2022
Serum neutralization of SARS-CoV-2 Omicron sublineages in patients receiving monoclonal antibodies
Full title: Serum neutralization of SARS-CoV-2 Omicron sublineages BA.1 and BA.2 in patients receiving monoclonal antibodies. Nat Med...
Mar 23, 2022
Developing sero-diagnostic tests to facilitate Plasmodium vivax Serological Test-and-Treat approache
Full title: Developing sero-diagnostic tests to facilitate Plasmodium vivax Serological Test-and-Treat approaches: balancing public...
Mar 18, 2022
SARS-CoV-2 Omicron emergence urges for reinforced One-Health surveillance
EMBO Mol Med Montagutelli X, van der Werf S, Rey FA, Simon-Loriere E SARS-CoV-2 Omicron harbors substitutions in the receptor binding...
Mar 7, 2022
RNAglib: a python package for RNA 2.5 D graphs
Bioinformatics Mallet V, Oliver C, Broadbent J, Hamilton WL, Waldispühl J RNA 3D architectures are stabilized by sophisticated networks of...
Mar 1, 2022
InDeep: 3D fully convolutional neural networks to assist in silico drug design
Full title: InDeep: 3D fully convolutional neural networks to assist in silico drug design on protein-protein interactions Bioinformatics...
Mar 1, 2022
Considerable escape of SARS-CoV-2 Omicron to antibody neutralization
Nature Planas D, Saunders N, Maes P, Guivel-Benhassine F, Planchais C, Buchrieser J, Bolland WH, Porrot F, Staropoli I, Lemoine F, Péré...
Feb 24, 2022
Specificities and commonalities of carbapenemase producing Escherichia coli
Full title: Specificities and commonalities of carbapenemase producing Escherichia coli isolated in France from 2012 to 2015 mSystems...
Feb 22, 2022
Effect of change in vaccine schedule on pertussis epidemiology in France: a modelling and serologica
Full title: Effect of change in vaccine schedule on pertussis epidemiology in France: a modelling and serological study Lancet Infect Dis...
Feb 22, 2022
A new SARS-CoV-2 variant with high lethality poorly detected by RT-PCR on nasopharyngeal samples
Clin Microbiol Infect Fillâtre P, Dufour MJ, Behillil S, Vatan R, Reusse P, Gabellec A, Velmans N, Montagne C, Geffroy Du Coudret S,...
Feb 1, 2022
CORSER-2A. High negative predictive value of RT-PCR in patients with high likelihood of SARS-CoV-2
Full title: CORSER-2A study group. High negative predictive value of RT-PCR in patients with high likelihood of SARS-CoV-2 infection....
Feb 1, 2022
Early chains of transmission of COVID-19 in France, January to March 2020
Euro Surveill Paireau J, Mailles A, Eisenhauer C, de Laval F, Delon F, Bosetti P, Salje H, Pontiès V, Cauchemez S SARS-CoV-2, the virus...
Feb 1, 2022
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