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May 24, 2023
A journey toward the diversity of people affected by autism
Thomas Bourgeron, the INCEPTION coordinator, has recently published a book entitled "Des gènes, des synapses, des autismes" on his...
Mar 24, 2023
MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes
Peer Community Journal Néron B, Denise R, Coluzzi C, Touchon M, Rocha EP, Abby SS. Complex cellular functions are usually encoded by a...
Feb 27, 2023
Yersiniomics, a Multi-Omics Interactive Database for Yersinia Species.
Microbiol Spectr. Lê-Bury P, Druart K, Savin C, Lechat P, Mas Fiol G, Matondo M, Bécavin C, Dussurget O, Pizarro-Cerdá J. The genus...
Dec 22, 2022
SVDSS: structural variation discovery in hard-to-call genomic regions using sample-specific strings
Full title: SVDSS: structural variation discovery in hard-to-call genomic regions using sample-specific strings from accurate long reads...
Oct 18, 2022
Structural and Genomic Evolution of RRNPPA Systems and Their Pheromone Signaling
mBio Felipe-Ruiz A, Marina A, Rocha EPC In Firmicutes, important processes such as competence development, sporulation, virulence, and...
Sep 29, 2022
Dynamics of SARS-CoV-2 lineages in French Guiana in 2020-2021
Full title: Dynamics of SARS-CoV-2 lineages in French Guiana in 2020-2021: 4 epidemic waves with cross-influences from Europe and South...
May 31, 2022
Gene-lifestyle interactions in the genomics of human complex traits
Eur J Hum Genet Laville V, Majarian T, Sung YJ, Schwander K, Feitosa MF, Chasman DI, Bentley AR, Rotimi CN, Cupples LA, de Vries PS,...
Mar 24, 2022
IntegronFinder 2.0: Identification and Analysis of Integrons across Bacteria
Full title: IntegronFinder 2.0: Identification and Analysis of Integrons across Bacteria, with a Focus on Antibiotic Resistance in...
Feb 22, 2022
Specificities and commonalities of carbapenemase producing Escherichia coli
Full title: Specificities and commonalities of carbapenemase producing Escherichia coli isolated in France from 2012 to 2015 mSystems...
Apr 13, 2021
Genomic insights into population history and biological adaptation in Oceania
Nature Choin J, Mendoza-Revilla J, Arauna LR, Cuadros-Espinoza S, Cassar O, Larena M, Min-Shan Ko A, Harmant C, Laurent R, Verdu P, Laval...
Jul 1, 2020
Introductions and early spread of SARS-CoV-2 in France, 24 January to 23 March 2020
Euro Surveill Gámbaro F, Behillil S, Baidaliuk A, Donati F, Albert M, Alexandru A, Vanpeene M, Bizard M, Brisebarre A, Barbet M, Derrar...
May 31, 2020
Genomic Epidemiology of 2015-2016 Zika Virus Outbreak in Cape Verde
Emerg Infect Dis Faye O, de Lourdes Monteiro M, Vrancken B, Prot M, Lequime S, Diarra M, Ndiaye O, Valdez T, Tavarez S, Ramos J, Lda...
Apr 20, 2020
Identification and molecular characterization of the first complete genome sequence
Scientific Reports Fernandez-Garcia MD, Simon-Loriere E, Kebe O, Sakuntabhai A, Ndiaye K Using a metagenomics approach, we have...
Feb 6, 2020
Community diversity and habitat structure shape the repertoire of extracellular proteins in bacteria
Nature Communications Marc Garcia-Garcera & Eduardo P. C. Rocha We test the hypothesis that the frequency and cost of extracellular...
Jan 24, 2020
Atypical organizations and epistatic interactions of CRISPRs and cas clusters in genomes
Nucleic Acids Research Aude Bernheim, David Bikard, Marie Touchon, Eduardo P C Rocha Prokaryotes use CRISPR–Cas systems for adaptive...
Nov 7, 2018
Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810
Microbiol Resour Announc Valérie Bouchez, Sarah Louise Baines, Sophie Guillot and Sylvain Brisse Microbiol Resour Announc. 2018 Nov;...
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