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Differential stress responsiveness determines intraspecies virulence heterogeneity and host adaptation in Listeria monocytogenes
Nature Microbiology Lukas Hafner, Enzo Gadin, Lei Huang, Arthur Frouin, Fabien Laporte, Charlotte Gaultier, Afonso Vieira, Claire Maudet,...
Assessing the effect of model specificationand prior sensitivity on Bayesian tests oftemporal signal
PLOS COMPUTATIONAL BIOLOGY John H. Tay, Arthur Kocher, Sebastian Duchene* Abstract Our understanding of the evolution of many microbes...
Expanding the diversity of origin of transfer-containing sequences inmobilizable plasmids
Nature Microbiology Manuel Ares-Arroyo, Amandine Nucci & Eduardo P. C. Rocha Abstract Conjugative plasmids are important drivers of...
Integrating information from historical datainto mechanistic models for influenzaforecasting
PLOS COMPUTATIONAL BIOLOGY Alessio Andronico, Juliette Paireau*, Simon Cauchemez Abstract Seasonal influenza causes significant annual...
Rifaximin prophylaxis causes resistance to the last-resort antibiotic daptomycin
Nature Adrianna M. Turner, Lucy Li, Ian R. Monk, Jean Y. H. Lee, Danielle J. Ingle, Stephanie Portelli, Norelle L. Sherry, Nicole Isles,...
Emergence of the B.1.214.2 SARS‑CoV‑2 lineage with an Omicron‑like spike insertion and a unique upper airway immune signature
BMC Infectious Diseases Andrew Holtz*†, Johan Van Weyenbergh*†, Samuel L. Hong, Lize Cuypers, Áine O’Toole, Gytis Dudas, Marco Gerdol,...
Longitudinal genomic analysis of Neisseria gonorrhoeae transmission dynamics in Australia
Nature Communications Mona L. Taouk, George Taiaroa, Sebastian Duchene, Soo Jen Low, Charlie K. Higgs, Darren Y. J. Lee, Shivani...
Antigenic sin and multiple breakthrough infectionsdrive converging evolution of COVID-19 neutralizingresponses
Cell Reports Ida Paciello, Giulio Pierleoni, Elisa Pantano, Giada Antonelli, Piero Pileri, Giuseppe Maccari, Dario Cardamone, Giulia...
A Genetic Bridge Between Medicine and Neurodiversity for Autism
Annual Review of Genetics Claire S. Leblond, Thomas Rolland, Eli Barthome, Zakaria Mougin, Mathis Fleury, Christine Ecker, Stéf...
Risk of SARS-CoV-2 infection in professional settings, shops, shared transport, and leisure activities in France, 2020–2022
BMC Public Health Simon Galmiche*, Tiffany Charmet, Arthur Rakover, Olivia Chény, Faïza Omar, Christophe David, Alexandra Mailles,...
scConfluence: single-cell diagonal integration with regularized Inverse Optimal Transport on weakly connected features
Nature Communications Jules Samaran, Gabriel Peyré & Laura Cantini Summary The abundance of unpaired multimodal single-cell data has...
Hijackers, hitchhikers, or co-drivers? Themysteries of mobilizable genetic elements
PLOS Biology Manuel Ares-Arroyo, Charles Coluzzi, Jorge A. Moura de Sousa, Eduardo P. C. Rocha* Abstract Mobile genetic elements shape...
CellTracksColab is a platform that enables compilation, analysis, and exploration of cell tracking data
PLOS Biology Estibaliz Gomez-de-Mariscal, Hanna Grobe, Joanna W. Pylvanainen, Laura Xenard, Ricardo Henriques, Jean-Yves Tinevez,...
Three-dimensional cell cultureconditions promoted theMesenchymal-AmoeboidTransition in the Triple-NegativeBreast Cancer cell line MDAMB-231
Frontiers in Cell and Developmental Biology Daniela Rodríguez-Cruz, Aleix Boquet-Pujadas, Eunice López-Muñoz, Ruth Rincón-Heredia,...
Fibronectin induces a transition fromamoeboid to a fan morphology and modifiesmigration in Entamoeba histolytica
PLOS PATHOGENS Maria Manich, Pascal Bochet, Aleix Boquet-Pujadas, Thierry Rose, Gertjan Laenen, Nancy Guillen, Jean-Christophe...
Trait selection strategy in multi-traitGWAS: Boosting SNP discoverability
HGG Advances Yuka Suzuki*, Hervé Ménager, Bryan Brancotte, Raphael Vernet, Cyril Nerin, Christophe Boetto, Antoine Auvergne, Christophe...
Transformation of spatial representations alonghippocampal circuits
iScience Bérénice Gandit, Lorenzo Posani, Chun-Lei Zhang, Soham Saha, Cantin Ortiz, Manuela Allegra* and Christoph Schmidt-Hieber*...
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