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New Approach to Accelerated Image Annotation by Leveraging Virtual Reality and Cloud Computing.
Front Bioinform Guérinot C, Marcon V, Godard C, Blanc T, Verdier H, Planchon G, Raimondi F, Boddaert N, Alonso M, Sailor K, Lledo PM,...
Jan 31, 2022
Vernal: a tool for mining fuzzy network motifs in RNA
Bioinformatics Oliver C, Mallet V, Philippopoulos P, Hamilton WL, Waldispühl J Motivation: RNA 3D motifs are recurrent substructures,...
Jan 27, 2022


Petabase-scale sequence alignment catalyses viral discovery
Nature Edgar, R.C., Taylor, J., Lin, V. et al Public databases contain a planetary collection of nucleic acid sequences, but their...
Jan 26, 2022
Epidemiology and control of SARS-CoV-2 epidemics in partially vaccinated populations
Bosetti P, Tran Kiem C, Andronico A, Colizza V, Yazdanpanah Y, Fontanet A, Benamouzig D, Cauchemez S Background: Vaccination is expected...
Jan 26, 2022
Towards Human in the Loop Analysis of Complex Point Clouds
Full title: Towards Human in the Loop Analysis of Complex Point Clouds: Advanced Visualizations, Quantifications, and Communication...
Jan 22, 2022
Sensitive visualization of SARS-CoV-2 RNA with CoronaFISH
Life Science Alliance Rensen E, Pietropaoli S, Mueller F, Weber C, Souquere S, Sommer S, Isnard P, Rabant M, Gibier JB, Terzi F,...
Jan 7, 2022
Impact of booster vaccination on the control of COVID-19 D wave in the context of waning immunity
Full title: Impact of booster vaccination on the control of COVID-19 Delta wave in the context of waning immunity: application to France...
Jan 6, 2022
Viral evolution sustains a dengue outbreak of enhanced severity
Emerg Microbes Infect Inizan C, Minier M, Prot M, O'Connor O, Forfait C, Laumond S, Marois I, Biron A, Gourinat AC, Goujart MA, Descloux...
Dec 1, 2021
Impact of SARS-CoV-2 Delta variant on incubation, transmission settings and vaccine effectiveness: R
The Lancet Regional Health - Europe Grant R, Charmet T, Schaeffer L, Galmiche S, Madec Y, Von Platen C, Chény O, Omar F, David C, Rogoff...
Nov 26, 2021
A modelling study investigating short and medium-term challenges for COVID-19 vaccination
Full title: A modelling study investigating short and medium-term challenges for COVID-19 vaccination: From prioritisation to the...
Nov 25, 2021
SARS-CoV-2 transmission across age groups in France and implications for control
Nature Communications Tran Kiem C, Bosetti P, Paireau J, Crépey P, Salje H, Lefrancq N, Fontanet A, Benamouzig D, Boëlle PY, Desenclos...
Nov 25, 2021
Model-based assessment of Chikungunya and O’nyong-nyong virus circulation
Nature communications Hozé N, Diarra I, Sangaré AK, Pastorino B, Pezzi L, Kouriba B, Sagara I, Dabo A, Djimdé A, Thera MA, Doumbo OK, de...
Nov 18, 2021
A Minimal yet Flexible Likelihood Framework to Assess Correlated Evolution
Systematic Biology Behdenna A, Godfroid M, Petot P, Pothier J, Lambert A, Achaz G An evolutionary process is reflected in the sequence...
Nov 2, 2021
LMT USV Toolbox, a Novel Methodological Approach to Place Mouse Ultrasonic Vocalizations in Their Be
Frontiers in Behavioral Neuroscience De Chaumant F, Lemière N, Coqueran S, Bourgeron T, Ey E Ultrasonic vocalizations (USVs) are used as...
Sep 30, 2021
Conformational Insights into the Control of CNF1 Toxin Activity by Peptidyl- Prolyl Isomerization
Full title: Conformational Insights into the Control of CNF1 Toxin Activity by Peptidyl- Prolyl Isomerization: A Molecular Dynamics...
Sep 19, 2021
Assessing the feasibility of Nipah vaccine efficacy trials based on previous outbreaks in Bangladesh
Vaccine Birgit Nikolay, Gabriel Ribeiro dos Santos, Marc Lipsitch, Mahmudur Rahman, Stephen P. Luby, Henrik Salje, Emily S. Gurley, Simon...
Sep 14, 2021
Multitrait GWAS to connect disease variants and biological mechanisms
PLoS Genet Julienne H, Laville V, McCaw ZR, He Z, Guillemot V, Lasry C, Ziyatdinov A, Nerin C, Vaysse A, Lechat P, Ménager H, Le Goff W,...
Aug 29, 2021
A Structural and Dynamic Analysis of the Partially Disordered Polymerase-Binding Domain in RSV Phosp
Biomolecules A Structural and Dynamic Analysis of the Partially Disordered Polymerase-Binding Domain in RSV Phosphoprotein Cardone C,...
Aug 16, 2021
Biogeographic drivers of community assembly on oceanic islands: the importance of archipelago struct
Journal of Biogeography Aguilée R, Pellerin F, Soubeyrand M, Choin J and Thébaud C Aim: Accounting for geo-environmental dynamics is...
Aug 9, 2021
Strainberry: automated strain separation in low-complexity metagenomes using long reads
Nat Commun Vicedomini R, Quince C, Darling AE, Chikhi R High-throughput short-read metagenomics has enabled large-scale species-level...
Jul 22, 2021
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