Nanopore long-read sequencing technology offers promising alternatives to high-throug
Summary: We implemented the Self-Organizing Maps algorithm running efficiently on GPUs, and also provide several clustering methods of the resulting maps.
Motivation: In this work we present REINDEER, a novel computational method that performs indexing of sequences and records their abund
Accurate measurements of cell morphology and behaviour are fundamentally important for understanding how disease, molecules and drugs affect cell function in vivo
The study of the gene repertoires of microbial species, their pangenomes, has become a key part of microbial evolution and functional genomics.
Motivation: Genome assembly is increasingly performed on long, uncorrected r
Nuclear magnetic resonance (NMR) spectroscopy is a method of choice to study the dynamics and determine the atomic structure of macromolecules in solution.
The quantity of experimentally recorded point cloud data, such generated in single-molecule experiments, is increasing continuously in both size and dimension.